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Excerpt
Resource LinkIntegrated System for Motif Activity Response Analysis (ISMARA)

DescriptionThe Integrated System for Motif Actitivity Response Analysis is an online tool for automatically inferring regulatory networks from gene expression (RNA-seq/ micro-array) or chromatin state (ChIP-seq) data.
Maintained byvan Nimwegen group of the Biozentrum, University of Basel and Swiss Institute of Bioinformatics.