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March 4November 15, 20202022. We are pleased to announce the PhyloGenes version 24.0. A total of 8512 gene families are included in this release1 release. This release updates only the GO annotation data and the publications counts for the gene family members. The gene families and gene trees are pruned versions of PANTHER 15are the same as for the PhyloGenes 4.0 release and are still from the PANTHER 17.0 release. They contain In PhyloGenes only genes from from plant genomes and selected non-plant model organismswere included. Genes from other genomes in the PANTHER build have been removed (pruned). Experimental More stats
Updated GO annotations: Experimental gene function data are annotations were extracted from the files available from the Gene Ontology Annotations (GOA) project at the EBI (file generated on 2020-02-07). More stats
What’s new:
- 10 more plant genomes were added to gene families including potato, cassava, oilseed rape (see complete species list here)
- You can select an organism to have its genes highlighted in a tree
- Easier tree browsing using mouse wheel or trackpad for scrolling
- Better alignment between a tree and its gene information table
- Compact UI showing more data on a family page
- Safari and Firefox browsers are now supported
In the pipeline:
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Consortium (files created by PANTHER on 2022-10-27, based on the 2022-07-01 GO release). Phylogenetic inferred gene function annotations were extracted from the GO PAINT project (generated on 2022-09-26, based on the 2022-07-01 GO release which uses PANTHER 15 tree information, downloaded by the PhyloGenes team on 2022-10-20).
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