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November 15, 2022. We are pleased to announce the PhyloGenes version 4.1 release.2 release (released on November 8, 2019). The gene family build has not changed in this release This release updates only the GO annotation data and the publications counts for the gene family members. The gene families and gene trees are pruned versions of PANTHER 14.1 release. They contain only genes from selected plant genomes and 10 are the same as for the PhyloGenes 4.0 release and are still from the PANTHER 17.0 release. In PhyloGenes only genes from plant genomes and selected non-plant model organismswere included. Genes from other genomes in the PANTHER build have been removed (pruned). More stats
What's new
Updated GO annotations: Experimental gene function
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annotations were extracted
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We enhanced the alignment between trees and their adjacent gene information tables. Leaf nodes in a tree now stay aligned with their corresponding gene rows in the gene table when resizing to a narrow browser window. We also fixed a rare data bug where some members were missing from the DUF641 gene family tree. If you notice anything else wrong please let us know!
In the pipeline
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from the Gene Ontology Consortium (files created by PANTHER on 2022-10-27, based on the 2022-07-01 GO release). Phylogenetic inferred gene function annotations were extracted from the GO PAINT project (generated on 2022-09-26, based on the 2022-07-01 GO release which uses PANTHER 15 tree information, downloaded by the PhyloGenes team on 2022-10-20).
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