Page History
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- a darker shading over an amino acid residue indicates that the residue is shared by 90% or more sequences at the same position.
- a lighter shading indicates a residue shared by more than 50% but less than 90% of sequences.
- the identity is calculated by including all protein sequences in a PhyloGenes family.
- sequence similarity is recalculated when a user chooses to run ‘prune tree by organism’. The pruned protein sequences are excluded in recalculating sequence similarity.
